› 3gos

X-ray diffraction
1.8Å resolution

The crystal structure of 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase from Yersinia pestis CO92

Released:
DOI: 10.2210/pdb3gos/pdb
PDB entry 3gos coloured by chain, front view.
PDB entry 3gos coloured by chain, side view.
PDB entry 3gos coloured by chain, top view.
Source organism: Yersinia pestis
Entry authors: Zhang R, Maltseva N, Kwon K, Anderson W, Joachimiak A, Center for Structural Genomics of Infectious Diseases (CSGID)

Function and Biology Details

Reaction catalysed: 
Succinyl-CoA + (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H(2)O = CoA + N-succinyl-L-2-amino-6-oxoheptanedioate
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-187207 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 276 amino acids
Theoretical weight: 30.19 KDa
Source organism: Yersinia pestis
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8ZH69 (Residues: 1-274; Coverage: 100%)
Gene names: YPO1041, YP_2810, dapD, y3140
Sequence domains:
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand MG 1 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P21
Unit cell:
a: 57.792Å b: 69.695Å c: 106.448Å
α: 90° β: 105.28° γ: 90°
R-values:
R R work R free
0.23 0.227 0.272
Expression system: Escherichia coli

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