› 3gt5

X-ray diffraction
1.7Å resolution

Crystal structure of an N-acetylglucosamine 2-epimerase family protein from Xylella fastidiosa

Released:
DOI: 10.2210/pdb3gt5/pdb
PDB entry 3gt5 coloured by chain, front view.
PDB entry 3gt5 coloured by chain, side view.
PDB entry 3gt5 coloured by chain, top view.
Source organism: Xylella fastidiosa M23
Entry authors: Bonanno JB, Rutter M, Bain KT, Iizuka M, Romero R, Wasserman S, Sauder JM, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-109607 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
N-acylglucosamine 2-epimerase Chain: A
Molecule details ›
Chain: A
Length: 402 amino acids
Theoretical weight: 47.33 KDa
Source organism: Xylella fastidiosa M23
Expression system: Escherichia coli
UniProt:
  • Canonical: B2I5L9 (Residues: 11-401; Coverage: 98%)
Gene name: XfasM23_1239
Sequence domains: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
Structure domains: Glycosyltransferase

Ligands and Environments

1 bound ligand:
Ligand CL 1 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 31-ID
Spacegroup: P212121
Unit cell:
a: 58.401Å b: 72.052Å c: 99.606Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.185 0.183 0.221
Expression system: Escherichia coli

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