› 3h35

X-ray diffraction
2.15Å resolution

Structure of the uncharacterized protein ABO_0056 from the hydrocarbon-degrading marine bacterium Alcanivorax borkumensis SK2.

Released:
DOI: 10.2210/pdb3h35/pdb
PDB entry 3h35 coloured by chain, front view.
PDB entry 3h35 coloured by chain, side view.
PDB entry 3h35 coloured by chain, top view.
Source organism: Alcanivorax borkumensis SK2
Entry authors: Cuff ME, Evdokimova E, Kagan O, Edwards A, Savchenko A, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-171178 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF4393 domain-containing protein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 185 amino acids
Theoretical weight: 20.63 KDa
Source organism: Alcanivorax borkumensis SK2
Expression system: Escherichia coli
UniProt:
  • Canonical: Q0VTF8 (Residues: 1-181; Coverage: 100%)
Gene name: ABO_0056
Structure domains: Translation Initiation Factor IF3

Ligands and Environments

2 bound ligands:
Ligand EDO 1 x EDO
Ligand SRT 1 x SRT
1 modified residue:
Ligand MSE 9 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P3221
Unit cell:
a: 82.967Å b: 82.967Å c: 131.485Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.176 0.174 0.212
Expression system: Escherichia coli

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