› 3h6e

X-ray diffraction
2.5Å resolution

The crystal structure of a carbohydrate kinase from Novosphingobium aromaticivorans

Released:
DOI: 10.2210/pdb3h6e/pdb
PDB entry 3h6e coloured by chain, front view.
PDB entry 3h6e coloured by chain, side view.
PDB entry 3h6e coloured by chain, top view.
Source organism: Novosphingobium aromaticivorans DSM 12444
Entry authors: Zhang Z, Burley SK, Swaminathan S, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-173572 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Carbohydrate kinase, FGGY Chains: A, B
Molecule details ›
Chains: A, B
Length: 482 amino acids
Theoretical weight: 53.31 KDa
Source organism: Novosphingobium aromaticivorans DSM 12444
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q2G9H7 (Residues: 2-472; Coverage: 99%)
Gene name: Saro_1051
Sequence domains:
Structure domains: Nucleotidyltransferase; domain 5

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 18 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P212121
Unit cell:
a: 52.614Å b: 81.198Å c: 229.134Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.223 0.22 0.274
Expression system: Escherichia coli BL21(DE3)

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