› 3hc7

X-ray diffraction
2Å resolution

Crystal structure of lysin B from Mycobacteriophage D29

Released:
DOI: 10.2210/pdb3hc7/pdb
PDB entry 3hc7 coloured by chain, front view.
PDB entry 3hc7 coloured by chain, side view.
PDB entry 3hc7 coloured by chain, top view.
Source organism: Mycobacterium virus D29
Primary publication:
Mycobacteriophage Lysin B is a novel mycolylarabinogalactan esterase.
Payne K, Sun Q, Sacchettini J, Hatfull GF
Mol Microbiol 73 367-81 (2009)
PMID: 19555454

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130267 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Endolysin B Chain: A
Molecule details ›
Chain: A
Length: 254 amino acids
Theoretical weight: 28.55 KDa
Source organism: Mycobacterium virus D29
Expression system: Escherichia coli
UniProt:
  • Canonical: O64205 (Residues: 1-254; Coverage: 100%)
Gene name: 12
Sequence domains: Cutinase
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-B
Spacegroup: P43212
Unit cell:
a: 92.53Å b: 92.53Å c: 69.63Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.205 0.205 0.25
Expression system: Escherichia coli

Quick links

Citations

12 review citations

Mycobacteriophages: genes and genomes.
Hatfull GF. (2010)
11 more

8 mentions without citation

New insights into the mycobacterial PE and PPE proteins provide a framework for future research.
Ates LS. (2020)
7 more