› 3hjg

X-ray diffraction
2.8Å resolution

Crystal structure of putative alpha-ribazole-5'-phosphate phosphatase CobC FROM Vibrio parahaemolyticus

Released:
DOI: 10.2210/pdb3hjg/pdb
PDB entry 3hjg coloured by chain, front view.
PDB entry 3hjg coloured by chain, side view.
PDB entry 3hjg coloured by chain, top view.
Source organism: Vibrio parahaemolyticus
Entry authors: Patskovsky Y, Toro R, Morano C, Rutter M, Iizuka M, Sauder JM, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183362 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative alpha-ribazole-5'-phosphate phosphatase CobC Chains: A, B
Molecule details ›
Chains: A, B
Length: 213 amino acids
Theoretical weight: 23.98 KDa
Source organism: Vibrio parahaemolyticus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q87Q43 (Residues: 2-203; Coverage: 99%)
Gene name: VP1307
Sequence domains: Histidine phosphatase superfamily (branch 1)
Structure domains: Phosphoglycerate mutase-like

Ligands and Environments

1 bound ligand:
Ligand SO4 4 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P41212
Unit cell:
a: 107.215Å b: 107.215Å c: 206.717Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.263 0.263 0.28
Expression system: Escherichia coli

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