› 3i7a

X-ray diffraction
2.06Å resolution

Crystal structure of Putative metal-dependent phosphohydrolase (YP_926882.1) from Shewanella amazonensis SB2B at 2.06 A resolution

Released:
DOI: 10.2210/pdb3i7a/pdb
PDB entry 3i7a coloured by chain, front view.
PDB entry 3i7a coloured by chain, side view.
PDB entry 3i7a coloured by chain, top view.
Source organism: Shewanella amazonensis SB2B
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-106692 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
HDOD domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 281 amino acids
Theoretical weight: 31.37 KDa
Source organism: Shewanella amazonensis SB2B
Expression system: Escherichia coli
UniProt:
  • Canonical: A1S4A6 (Residues: 1-280; Coverage: 100%)
Gene name: Sama_1005
Sequence domains: HDOD domain
Structure domains: Hypothetical protein af1432

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 8 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P41
Unit cell:
a: 76.626Å b: 76.626Å c: 57.783Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.188 0.185 0.236
Expression system: Escherichia coli

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