› 3ib3

X-ray diffraction
2.05Å resolution

Crystal Structure of SACOL2612 - CocE/NonD family hydrolase from Staphylococcus aureus

Released:
DOI: 10.2210/pdb3ib3/pdb
PDB entry 3ib3 coloured by chain, front view.
PDB entry 3ib3 coloured by chain, side view.
PDB entry 3ib3 coloured by chain, top view.
Source organism: Staphylococcus aureus subsp. aureus COL
Entry authors: Domagalski MJ, Chruszcz M, Osinski T, Skarina T, Onopriyenko O, Cymborowski M, Shumilin IA, Savchenko A, Edwards A, Anderson W, Minor W, Center for Structural Genomics of Infectious Diseases (CSGID)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-101627 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Xaa-Pro dipeptidyl-peptidase C-terminal domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 560 amino acids
Theoretical weight: 64.93 KDa
Source organism: Staphylococcus aureus subsp. aureus COL
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A0H2WZL3 (Residues: 1-560; Coverage: 100%)
Gene name: SACOL2612
Sequence domains:
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand CL 4 x CL
Ligand PLM 1 x PLM
Ligand NI 1 x NI
1 modified residue:
Ligand MSE 26 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: C2221
Unit cell:
a: 66.221Å b: 160.583Å c: 216.827Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.194 0.19 0.25
Expression system: Escherichia coli

Quick links