› 3ihv

X-ray diffraction
1.7Å resolution

Crystal structure of SusD homolog (NP_813570.1) from Bacteroides thetaiotaomicron VPI-5482 at 1.70 A resolution

Released:
DOI: 10.2210/pdb3ihv/pdb
PDB entry 3ihv coloured by chain, front view.
PDB entry 3ihv coloured by chain, side view.
PDB entry 3ihv coloured by chain, top view.
Source organism: Bacteroides thetaiotaomicron VPI-5482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183570 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SusD homolog Chains: A, B
Molecule details ›
Chains: A, B
Length: 535 amino acids
Theoretical weight: 61.32 KDa
Source organism: Bacteroides thetaiotaomicron VPI-5482
Expression system: Escherichia coli
UniProt:
  • Canonical: Q89YS2 (Residues: 24-557; Coverage: 100%)
Gene name: BT_4659
Sequence domains:
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand CL 4 x CL
Ligand NA 4 x NA
Ligand EDO 20 x EDO
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P21
Unit cell:
a: 62.908Å b: 72.318Å c: 131.629Å
α: 90° β: 97.31° γ: 90°
R-values:
R R work R free
0.163 0.162 0.193
Expression system: Escherichia coli

Quick links