› 3ijs

X-ray diffraction
2.55Å resolution

Structure of S67-27 in Complex with TSBP

Released:
DOI: 10.2210/pdb3ijs/pdb
PDB entry 3ijs coloured by chain, front view.
PDB entry 3ijs coloured by chain, side view.
PDB entry 3ijs coloured by chain, top view.
Source organism: Mus musculus
Primary publication:
The role of CDR H3 in antibody recognition of a synthetic analog of a lipopolysaccharide antigen.
Brooks CL, Blackler RJ, Sixta G, Kosma P, Müller-Loennies S, Brade L, Hirama T, MacKenzie CR, Brade H, Evans SV
Glycobiology 20 138-47 (2010)
PMID: 19767317

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-213287 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (3 distinct):
Immunoglobulin light chain (IGG3) Chains: A, C
Molecule details ›
Chains: A, C
Length: 219 amino acids
Theoretical weight: 24.19 KDa
Source organism: Mus musculus
Structure domains: Immunoglobulins
Immunoglobulin heavy chain (IGG3) Chains: B, D
Molecule details ›
Chains: B, D
Length: 226 amino acids
Theoretical weight: 24.53 KDa
Source organism: Mus musculus
Structure domains: Immunoglobulins

Ligands and Environments

Carbohydrate polymer : NEW Components: GP4, KDO
Carbohydrate polymer
1 bound ligand:
Ligand MG 2 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P212121
Unit cell:
a: 46.32Å b: 127.91Å c: 156.46Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.219 0.217 0.26

Quick links

Citations

1 review citation

Computer-aided antibody design.
Kuroda et al. (2012)
6 other articles