› 3in6

X-ray diffraction
2.12Å resolution

Crystal structure of a fmn-binding protein (swol_0183) from syntrophomonas wolfei subsp. wolfei at 2.12 A resolution

Released:
DOI: 10.2210/pdb3in6/pdb
PDB entry 3in6 coloured by chain, front view.
PDB entry 3in6 coloured by chain, side view.
PDB entry 3in6 coloured by chain, top view.
Source organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170853 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Pyridoxamine 5'-phosphate oxidase putative domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 148 amino acids
Theoretical weight: 17.18 KDa
Source organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
Expression system: Escherichia coli
UniProt:
  • Canonical: Q0B0G9 (Residues: 1-147; Coverage: 100%)
Gene name: Swol_0183
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand FMN 2 x FMN
Ligand MPD 1 x MPD
1 modified residue:
Ligand MSE 8 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P42212
Unit cell:
a: 103.108Å b: 103.108Å c: 59.786Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.221 0.219 0.254
Expression system: Escherichia coli

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