› 3izo

Electron Microscopy
3.6Å resolution

Model of the fiber tail and its interactions with the penton base of human adenovirus by cryo-electron microscopy

Released:
DOI: 10.2210/pdb3izo/pdb
PDB entry 3izo coloured by chain, front view.
PDB entry 3izo coloured by chain, side view.
PDB entry 3izo coloured by chain, top view.
Source organism: Human adenovirus 5
Primary publication:
Model of the trimeric fiber and its interactions with the pentameric penton base of human adenovirus by cryo-electron microscopy.
Liu H, Wu L, Zhou ZH
J Mol Biol 406 764-74 (2011)
PMID: 21146538
Related structures: EMD-7034

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero octamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-146262 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Penton protein Chains: A, B, C, D, E
Molecule details ›
Chains: A, B, C, D, E
Length: 571 amino acids
Theoretical weight: 63.36 KDa
Source organism: Human adenovirus 5
UniProt:
  • Canonical: P12538 (Residues: 1-571; Coverage: 100%)
Gene name: L2
Sequence domains: Adenovirus penton base protein
Structure domains:
Adenoviral fibre protein knob domain-containing protein Chains: F, G, H
Molecule details ›
Chains: F, G, H
Length: 581 amino acids
Theoretical weight: 61.63 KDa
Source organism: Human adenovirus 5
UniProt:
  • Canonical: Q7T416 (Residues: 1-581; Coverage: 100%)
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.6Å
Relevant EMDB volumes: EMD-7034

Quick links

Citations

7 review citations

Latest insights on adenovirus structure and assembly.
San Martín C. (2012)
6 more

7 mentions without citation

Structure and assembly of complex viruses.
San Martín C. (2013)
6 more