› 3j06

Electron Microscopy
3.3Å resolution

CryoEM Helical Reconstruction of TMV

Released:
DOI: 10.2210/pdb3j06/pdb
PDB entry 3j06 coloured by chain, front view.
PDB entry 3j06 coloured by chain, side view.
PDB entry 3j06 coloured by chain, top view.
Source organism: Tobacco mosaic virus (vulgare)
Primary publication:
Hydrogen-bonding networks and RNA bases revealed by cryo electron microscopy suggest a triggering mechanism for calcium switches.
Ge P, Zhou ZH
Proc Natl Acad Sci U S A 108 9637-42 (2011)
PMID: 21586634
Related structures: EMD-5185

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 98-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-159632 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct RNA molecule
Macromolecules (2 distinct):
Capsid protein Chain: A
Molecule details ›
Chain: A
Length: 159 amino acids
Theoretical weight: 17.64 KDa
Source organism: Tobacco mosaic virus (vulgare)
UniProt:
  • Canonical: P69687 (Residues: 1-159; Coverage: 100%)
Gene name: CP
Sequence domains: Virus coat protein (TMV like)
Structure domains: Tobacco mosaic virus-like, coat protein
5'-R(P*AP*UP*G)-3' Chain: R
Molecule details ›
Chain: R
Length: 3 nucleotides
Theoretical weight: 936 Da
Source organism: Tobacco mosaic virus (vulgare)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.3Å
Relevant EMDB volumes: EMD-5185

Quick links

Citations

16 review citations

The physics of tobacco mosaic virus and virus-based devices in biotechnology.
Alonso et al. (2013)
15 more

9 mentions without citation

Protein-based nanoparticles in cancer vaccine development.
Neek et al. (2019)
8 more