› 3j7l

Electron Microscopy
3.8Å resolution

Full virus map of brome mosaic virus

Released:
DOI: 10.2210/pdb3j7l/pdb
PDB entry 3j7l coloured by chain, front view.
PDB entry 3j7l coloured by chain, side view.
PDB entry 3j7l coloured by chain, top view.
Source organism: Brome mosaic virus
Primary publication:
An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Wang Z, Hryc CF, Bammes B, Afonine PV, Jakana J, Chen DH, Liu X, Baker ML, Kao C, Ludtke SJ, Schmid MF, Adams PD, Chiu W
Nat Commun 5 4808 (2014)
PMID: 25185801
Related structures: EMD-6000

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
homo 180-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-137127 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 189 amino acids
Theoretical weight: 20.41 KDa
Source organism: Brome mosaic virus
UniProt:
  • Canonical: P03602 (Residues: 1-189; Coverage: 100%)
Gene name: ORF3b
Sequence domains: Bromovirus coat protein
Structure domains: Satellite virus coat domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.8Å
Relevant EMDB volumes: EMD-6000

Quick links

Citations

9 review citations

Cryo-EM: A Unique Tool for the Visualization of Macromolecular Complexity.
Nogales et al. (2015)
8 more

6 mentions without citation

Tools for Model Building and Optimization into Near-Atomic Resolution Electron Cryo-Microscopy Density Maps.
DiMaio et al. (2016)
5 more