3jb6

Electron Microscopy
3.3Å resolution

In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus

Released:
Source organism: Bombyx mori cypovirus 1
Related structures: EMD-6408

Function and Biology Details

Reaction catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-111974 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
RdRp catalytic domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 1225 amino acids
Theoretical weight: 138.81 KDa
Source organism: Bombyx mori cypovirus 1
UniProt:
  • Canonical: D0EZK6 (Residues: 1-1225; Coverage: 100%)
Viral structural protein 4 Chain: B
Molecule details ›
Chain: B
Length: 561 amino acids
Theoretical weight: 63.68 KDa
Source organism: Bombyx mori cypovirus 1
UniProt:
  • Canonical: Q9IR43 (Residues: 1-561; Coverage: 100%)
VP1 Chains: C, D
Molecule details ›
Chains: C, D
Length: 24 amino acids
Theoretical weight: 2.73 KDa
Source organism: Bombyx mori cypovirus 1
UniProt:
  • Canonical: D3JWE6 (Residues: 111-134; Coverage: 2%)

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.3Å
Relevant EMDB volumes: EMD-6408