› 3jsy

X-ray diffraction
1.6Å resolution

N-terminal fragment of ribosomal protein L10 from Methanococcus jannaschii

Released:
DOI: 10.2210/pdb3jsy/pdb
PDB entry 3jsy coloured by chain, front view.
PDB entry 3jsy coloured by chain, side view.
PDB entry 3jsy coloured by chain, top view.
Source organism: Methanocaldococcus jannaschii
Primary publication:
Structure of a two-domain N-terminal fragment of ribosomal protein L10 from Methanococcus jannaschii reveals a specific piece of the archaeal ribosomal stalk.
Kravchenko O, Mitroshin I, Nikonov S, Piendl W, Garber M
J Mol Biol 399 214-20 (2010)
PMID: 20399793

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-156930 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Large ribosomal subunit protein uL10 Chains: A, B
Molecule details ›
Chains: A, B
Length: 213 amino acids
Theoretical weight: 23.35 KDa
Source organism: Methanocaldococcus jannaschii
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P54049 (Residues: 10-221; Coverage: 63%)
Gene names: MJ0509, rpl10, rplP0
Sequence domains:
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: MAX II BEAMLINE I911-5
Spacegroup: P212121
Unit cell:
a: 57Å b: 70.08Å c: 97.96Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.229 0.182 0.233
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

2 review citations

Structures of eukaryotic ribosomal stalk proteins and its complex with trichosanthin, and their implications in recruiting ribosome-inactivating proteins to the ribosomes.
Choi et al. (2015)
1 more

2 mentions without citation

Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
Armache et al. (2013)
1 more