› 3ju2

X-ray diffraction
1.8Å resolution

CRYSTAL STRUCTURE OF PROTEIN SMc04130 FROM Sinorhizobium meliloti 1021

Released:
DOI: 10.2210/pdb3ju2/pdb
PDB entry 3ju2 coloured by chain, front view.
PDB entry 3ju2 coloured by chain, side view.
PDB entry 3ju2 coloured by chain, top view.
Source organism: Sinorhizobium meliloti
Entry authors: Patskovsky Y, Foti R, Ramagopal U, Malashkevich V, Toro R, Freeman J, Miller S, Sauder JM, Raushel FM, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-187929 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Xylose isomerase-like TIM barrel domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 284 amino acids
Theoretical weight: 30.56 KDa
Source organism: Sinorhizobium meliloti
Expression system: Escherichia coli
UniProt:
  • Canonical: Q92T58 (Residues: 2-274; Coverage: 100%)
Gene name: SMc04130
Sequence domains: Xylose isomerase-like TIM barrel
Structure domains: Divalent-metal-dependent TIM barrel enzymes

Ligands and Environments

2 bound ligands:
Ligand GOL 3 x GOL
Ligand ZN 1 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P6522
Unit cell:
a: 92.102Å b: 92.102Å c: 157.345Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.201 0.199 0.246
Expression system: Escherichia coli

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