› 3jv5

X-ray diffraction
2.65Å resolution

Crystal structure of the dimerization domains p52 homodimer

Released:
DOI: 10.2210/pdb3jv5/pdb
PDB entry 3jv5 coloured by chain, front view.
PDB entry 3jv5 coloured by chain, side view.
PDB entry 3jv5 coloured by chain, top view.
Source organism: Mus musculus
Entry authors: Vu D, Huang DB, Ghosh G

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-194378 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nuclear factor NF-kappa-B p52 subunit Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 104 amino acids
Theoretical weight: 12.1 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q9WTK5 (Residues: 225-328; Coverage: 12%)
Gene name: Nfkb2
Sequence domains: Rel homology dimerisation domain
Structure domains: Immunoglobulins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: P21
Unit cell:
a: 46.433Å b: 56.863Å c: 102.192Å
α: 90° β: 97.77° γ: 90°
R-values:
R R work R free
0.209 0.209 0.268
Expression system: Escherichia coli BL21

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