› 3jys

X-ray diffraction
2Å resolution

Crystal structure of SusD superfamily protein (YP_001298690.1) from Bacteroides vulgatus ATCC 8482 at 2.00 A resolution

Released:
DOI: 10.2210/pdb3jys/pdb
PDB entry 3jys coloured by chain, front view.
PDB entry 3jys coloured by chain, side view.
PDB entry 3jys coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107866 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative outer membrane protein, probably involved in nutrient binding Chain: A
Molecule details ›
Chain: A
Length: 499 amino acids
Theoretical weight: 56.81 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6L054 (Residues: 38-535; Coverage: 97%)
Gene name: BVU_1379
Sequence domains:
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand MG 1 x MG
1 modified residue:
Ligand MSE 9 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P41212
Unit cell:
a: 63.929Å b: 63.929Å c: 266.398Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.179 0.178 0.198
Expression system: Escherichia coli

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