› 3k11

X-ray diffraction
1.8Å resolution

Crystal structure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution

Released:
DOI: 10.2210/pdb3k11/pdb
PDB entry 3k11 coloured by chain, front view.
PDB entry 3k11 coloured by chain, side view.
PDB entry 3k11 coloured by chain, top view.
Source organism: Bacteroides thetaiotaomicron VPI-5482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183588 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycoside hydrolase family 88 protein Chain: A
Molecule details ›
Chain: A
Length: 445 amino acids
Theoretical weight: 50.8 KDa
Source organism: Bacteroides thetaiotaomicron VPI-5482
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8A045 (Residues: 22-465; Coverage: 100%)
Gene name: BT_4176
Sequence domains: Glycosyl Hydrolase Family 88
Structure domains: Glycosyltransferase

Ligands and Environments

2 bound ligands:
Ligand EDO 19 x EDO
Ligand MES 1 x MES
1 modified residue:
Ligand MSE 10 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P6322
Unit cell:
a: 121.135Å b: 121.135Å c: 182.812Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.151 0.15 0.171
Expression system: Escherichia coli

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