3kth

X-ray diffraction
3Å resolution

Structure of ClpP from Bacillus subtilis in orthorombic crystal form

Released:

Function and Biology Details

Reaction catalysed:
Hydrolysis of proteins to small peptides in the presence of ATP and magnesium. Alpha-Casein is the usual test substrate. In the absence of ATP, only oligopeptides shorter than five residues are hydrolyzed (such as succinyl-Leu-Tyr-|-NHMec; and Leu-Tyr-Leu-|-Tyr-Trp, in which cleavage of the -Tyr-|-Leu- and -Tyr-|-Trp bonds also occurs).

Structure analysis Details

Assembly composition:
homo heptamer (preferred)
PDBe Complex ID:
PDB-CPX-160374 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
ATP-dependent Clp protease proteolytic subunit Chains: A, B, C, D, E, F, G
Molecule details ›
Chains: A, B, C, D, E, F, G
Length: 199 amino acids
Theoretical weight: 22.04 KDa
Source organism: Bacillus subtilis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P80244 (Residues: 2-197; Coverage: 100%)
Gene names: BSU34540, clpP, yvdN
Sequence domains: Clp protease
Structure domains: 2-enoyl-CoA Hydratase; Chain A, domain 1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE AR-NW12A
Spacegroup: P21212
Unit cell:
a: 96.293Å b: 108.117Å c: 152.644Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.248 0.248 0.275
Expression system: Escherichia coli BL21(DE3)