› 3lew

X-ray diffraction
1.7Å resolution

Crystal structure of SusD-like carbohydrate binding protein (YP_001298396.1) from Bacteroides vulgatus ATCC 8482 at 1.70 A resolution

Released:
DOI: 10.2210/pdb3lew/pdb
PDB entry 3lew coloured by chain, front view.
PDB entry 3lew coloured by chain, side view.
PDB entry 3lew coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107859 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative outer membrane protein, probably involved in nutrient binding Chain: A
Molecule details ›
Chain: A
Length: 495 amino acids
Theoretical weight: 56.69 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6KZB0 (Residues: 23-516; Coverage: 96%)
Gene name: BVU_1083
Sequence domains:
Structure domains: Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat

Ligands and Environments

2 bound ligands:
Ligand 1PE 12 x 1PE
Ligand 2PE 1 x 2PE
1 modified residue:
Ligand MSE 7 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: C2
Unit cell:
a: 191.772Å b: 46.707Å c: 73.524Å
α: 90° β: 106.55° γ: 90°
R-values:
R R work R free
0.146 0.145 0.17
Expression system: Escherichia coli

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