› 3lp9

X-ray diffraction
2.2Å resolution

Crystal structure of LS24, A Seed Albumin from Lathyrus sativus

Released:
DOI: 10.2210/pdb3lp9/pdb
PDB entry 3lp9 coloured by chain, front view.
PDB entry 3lp9 coloured by chain, side view.
PDB entry 3lp9 coloured by chain, top view.
Source organism: Lathyrus sativus
Primary publication:
Crystal structure and functional insights of hemopexin fold protein from grass pea.
Gaur V, Qureshi IA, Singh A, Chanana V, Salunke DM
Plant Physiol 152 1842-50 (2010)
PMID: 20147493

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-112613 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Albumin-2 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 227 amino acids
Theoretical weight: 25.72 KDa
Source organism: Lathyrus sativus
UniProt:
  • Canonical: D4AEP7 (Residues: 1-227; Coverage: 100%)
Sequence domains: Hemopexin
Structure domains: Hemopexin-like domain

Ligands and Environments

4 bound ligands:
Ligand CA 4 x CA
Ligand CL 4 x CL
Ligand NA 4 x NA
Ligand SPM 1 x SPM
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU300
Spacegroup: P212121
Unit cell:
a: 83.17Å b: 88.14Å c: 154.53Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.247 0.244 0.266

Quick links

Citations

1 review citation

Perspectives on the genetic improvement of health- and nutrition-related traits in pea.
Robinson et al. (2021)
10 other articles

3 mentions without citation

Evolution of a horizontally acquired legume gene, albumin 1, in the parasitic plant Phelipanche aegyptiaca and related species.
Zhang et al. (2013)
2 more