› 3mcp

X-ray diffraction
3Å resolution

Crystal structure of Glucokinase (BDI_1628) from Parabacteroides distasonis ATCC 8503 at 3.00 A resolution

Released:
DOI: 10.2210/pdb3mcp/pdb
PDB entry 3mcp coloured by chain, front view.
PDB entry 3mcp coloured by chain, side view.
PDB entry 3mcp coloured by chain, top view.
Source organism: Parabacteroides distasonis ATCC 8503
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107928 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glucokinase Chain: A
Molecule details ›
Chain: A
Length: 366 amino acids
Theoretical weight: 39.3 KDa
Source organism: Parabacteroides distasonis ATCC 8503
Expression system: Escherichia coli
UniProt:
  • Canonical: A6LCG6 (Residues: 1-365; Coverage: 100%)
Gene name: BDI_1628
Sequence domains: ROK family
Structure domains: Nucleotidyltransferase; domain 5

Ligands and Environments

2 bound ligands:
Ligand GOL 2 x GOL
Ligand FMT 1 x FMT
1 modified residue:
Ligand MSE 9 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P43212
Unit cell:
a: 80.732Å b: 80.732Å c: 142.581Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.209 0.206 0.249
Expression system: Escherichia coli

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