› 3n0q

X-ray diffraction
1.8Å resolution

Crystal structure of a Putative aromatic-ring hydroxylating dioxygenase (TM1040_3219) from SILICIBACTER SP. TM1040 at 1.80 A resolution

Released:
DOI: 10.2210/pdb3n0q/pdb
PDB entry 3n0q coloured by chain, front view.
PDB entry 3n0q coloured by chain, side view.
PDB entry 3n0q coloured by chain, top view.
Source organism: Ruegeria sp. TM1040
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-172847 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rieske domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 409 amino acids
Theoretical weight: 46.49 KDa
Source organism: Ruegeria sp. TM1040
Expression system: Escherichia coli
UniProt:
  • Canonical: Q1GMC3 (Residues: 1-408; Coverage: 100%)
Gene names: TM1040_3219, benA
Sequence domains:
Structure domains:

Ligands and Environments

5 bound ligands:
Ligand FES 1 x FES
Ligand NI 2 x NI
Ligand CL 1 x CL
Ligand TRS 2 x TRS
Ligand GOL 2 x GOL
1 modified residue:
Ligand MSE 6 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P63
Unit cell:
a: 97.533Å b: 97.533Å c: 96.522Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.156 0.154 0.186
Expression system: Escherichia coli

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