› 3nb3

Electron Microscopy
19Å resolution

The host outer membrane proteins OmpA and OmpC are packed at specific sites in the Shigella phage Sf6 virion as structural components

Released:
DOI: 10.2210/pdb3nb3/pdb
PDB entry 3nb3 coloured by chain, front view.
PDB entry 3nb3 coloured by chain, side view.
PDB entry 3nb3 coloured by chain, top view.
Source organism: Escherichia coli K-12
Primary publication:
The host outer membrane proteins OmpA and OmpC are associated with the Shigella phage Sf6 virion.
Zhao H, Sequeira RD, Galeva NA, Tang L
Virology 409 319-27 (2011)
PMID: 21071053
Related structures: EMD-5201

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 240-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-139330 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Outer membrane protein A Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 346 amino acids
Theoretical weight: 37.27 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A910 (Residues: 1-346; Coverage: 100%)
Gene names: JW0940, b0957, con, ompA, tolG, tut
Sequence domains:
Outer membrane porin C Chain: D
Molecule details ›
Chain: D
Length: 346 amino acids
Theoretical weight: 38.34 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P06996 (Residues: 22-367; Coverage: 100%)
Gene names: JW2203, b2215, meoA, ompC, par
Sequence domains: Gram-negative porin

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 19Å
Relevant EMDB volumes: EMD-5201

Quick links

Citations

9 citation in other articles

OmpA and OmpC are critical host factors for bacteriophage Sf6 entry in Shigella.
Parent et al. (2014)
8 more

4 mentions without citation

Ecology, Structure, and Evolution of Shigella Phages.
Subramanian et al. (2020)
3 more