› 3nng

X-ray diffraction
2.18Å resolution

Crystal structure of the F5/8 type C domain of Q5LFR2_BACFN protein from Bacteroides fragilis. Northeast Structural Genomics Consortium Target BfR258E

Released:
DOI: 10.2210/pdb3nng/pdb
PDB entry 3nng coloured by chain, front view.
PDB entry 3nng coloured by chain, side view.
PDB entry 3nng coloured by chain, top view.
Source organism: Bacteroides fragilis NCTC 9343
Entry authors: Vorobiev S, Su M, Dimaio F, Baker D, Seetharaman J, Janjua J, Xiao R, Ciccosanti C, Foote EL, Lee D, Everett JK, Nair R, Acton TB, Rost B, Montelione GT, Hunt JF, Tong L, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-104702 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
uncharacterized protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 168 amino acids
Theoretical weight: 19.13 KDa
Source organism: Bacteroides fragilis NCTC 9343
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A380YW85 (Residues: 179-337; Coverage: 50%)
Gene name: BF9343_1250
Sequence domains: F5/8 type C domain
Structure domains: Galactose-binding domain-like

Ligands and Environments

1 bound ligand:
Ligand CA 2 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4C
Spacegroup: P212121
Unit cell:
a: 57.208Å b: 62.463Å c: 72.001Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.167 0.164 0.224
Expression system: Escherichia coli BL21(DE3)

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