› 3nqi

X-ray diffraction
1.87Å resolution

Crystal structure of a Putative lipoprotein (BF3042) from Bacteroides fragilis NCTC 9343 at 1.87 A resolution

Released:
DOI: 10.2210/pdb3nqi/pdb
PDB entry 3nqi coloured by chain, front view.
PDB entry 3nqi coloured by chain, side view.
PDB entry 3nqi coloured by chain, top view.
Source organism: Bacteroides fragilis NCTC 9343
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo tetramer
Assembly name:
PDBe Complex ID:
PDB-CPX-104696 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lipoprotein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 246 amino acids
Theoretical weight: 27.2 KDa
Source organism: Bacteroides fragilis NCTC 9343
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A380YR22 (Residues: 24-267; Coverage: 100%)
Gene name: BF9343_2956
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand CD 20 x CD
Ligand CL 9 x CL
Ligand PEG 11 x PEG
Ligand ACT 4 x ACT
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: C2
Unit cell:
a: 157.49Å b: 77.227Å c: 97.406Å
α: 90° β: 103.85° γ: 90°
R-values:
R R work R free
0.192 0.191 0.22
Expression system: Escherichia coli

Quick links