› 3p94

X-ray diffraction
1.93Å resolution

Crystal structure of a GDSL-like Lipase (BDI_0976) from Parabacteroides distasonis ATCC 8503 at 1.93 A resolution

Released:
DOI: 10.2210/pdb3p94/pdb
PDB entry 3p94 coloured by chain, front view.
PDB entry 3p94 coloured by chain, side view.
PDB entry 3p94 coloured by chain, top view.
Source organism: Parabacteroides distasonis ATCC 8503
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo tetramer
homo dimer
Assembly name:
PDBe Complex ID:
PDB-CPX-107914 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SGNH hydrolase-type esterase domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 204 amino acids
Theoretical weight: 23.13 KDa
Source organism: Parabacteroides distasonis ATCC 8503
Expression system: Escherichia coli
UniProt:
  • Canonical: A6LAN0 (Residues: 25-227; Coverage: 99%)
Gene name: BDI_0976
Sequence domains: GDSL-like Lipase/Acylhydrolase family
Structure domains: SGNH hydrolase

Ligands and Environments

1 bound ligand:
Ligand PG4 2 x PG4
1 modified residue:
Ligand MSE 24 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P21
Unit cell:
a: 72.8Å b: 58.36Å c: 98.61Å
α: 90° β: 98.12° γ: 90°
R-values:
R R work R free
0.184 0.183 0.207
Expression system: Escherichia coli

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