› 3pgb

X-ray diffraction
2.45Å resolution

Crystal structure of Aspergillus nidulans amine oxidase

Released:
DOI: 10.2210/pdb3pgb/pdb
PDB entry 3pgb coloured by chain, front view.
PDB entry 3pgb coloured by chain, side view.
PDB entry 3pgb coloured by chain, top view.
Source organism: Aspergillus nidulans
Primary publication:
Structure and activity of Aspergillus nidulans copper amine oxidase.
McGrath AP, Mithieux SM, Collyer CA, Bakhuis JG, van den Berg M, Sein A, Heinz A, Schmelzer C, Weiss AS, Guss JM
Biochemistry 50 5718-30 (2011)
PMID: 21604787

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-176888 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (3 distinct):
Amine oxidase Chain: A
Molecule details ›
Chain: A
Length: 797 amino acids
Theoretical weight: 90.65 KDa
Source organism: Aspergillus nidulans
Expression system: Aspergillus niger
UniProt:
  • Canonical: Q5B038 (Residues: 21-817; Coverage: 100%)
Gene name: ANIA_06092
Sequence domains:
Structure domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer
3 bound ligands:
Ligand CU 1 x CU
Ligand CA 2 x CA
Ligand NAG 3 x NAG
1 modified residue:
Ligand TPQ 1 x TPQ

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: I422
Unit cell:
a: 179.861Å b: 179.861Å c: 148.178Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.213 0.211 0.254
Expression system: Aspergillus niger

Quick links

Citations

1 review citation

25th anniversary article: Rational design and applications of hydrogels in regenerative medicine.
Annabi et al. (2014)
15 other articles

1 mention without citation

Copper active sites in biology.
Solomon et al. (2014)