› 3phy

Solution NMR

PHOTOACTIVE YELLOW PROTEIN, DARK STATE (UNBLEACHED), SOLUTION STRUCTURE, NMR, 26 STRUCTURES

Released:
DOI: 10.2210/pdb3phy/pdb
PDB entry 3phy coloured by chain, ensemble of 26 models, front view.
PDB entry 3phy coloured by chain, ensemble of 26 models, side view.
PDB entry 3phy coloured by chain, ensemble of 26 models, top view.
Source organism: Halorhodospira halophila
Primary publication:
Solution structure and backbone dynamics of the photoactive yellow protein.
Düx P, Rubinstenn G, Vuister GW, Boelens R, Mulder FA, Hård K, Hoff WD, Kroon AR, Crielaard W, Hellingwerf KJ, Kaptein R
Biochemistry 37 12689-99 (1998)
PMID: 9737845

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-147624 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Photoactive yellow protein Chain: A
Molecule details ›
Chain: A
Length: 125 amino acids
Theoretical weight: 13.89 KDa
Source organism: Halorhodospira halophila
UniProt:
  • Canonical: P16113 (Residues: 1-125; Coverage: 100%)
Gene name: pyp
Sequence domains: PAS fold
Structure domains: PAS domain

Ligands and Environments

1 bound ligand:
Ligand HC4 1 x HC4
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: distance geometry

Quick links

Citations

6 review citations

Regulated unfolding of proteins in signaling.
Mitrea et al. (2013)
5 more

12 mentions without citation

A decade and a half of protein intrinsic disorder: biology still waits for physics.
Uversky VN. (2013)
11 more