› 3sd8

X-ray diffraction
1.67Å resolution

Crystal structure of Ara-FHNA decamer DNA

Released:
DOI: 10.2210/pdb3sd8/pdb
PDB entry 3sd8 coloured by chain, front view.
PDB entry 3sd8 coloured by chain, side view.
PDB entry 3sd8 coloured by chain, top view.
Source organism: Synthetic construct
Entry authors: Egli M, Pallan PS

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-116877 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D(*GP*CP*GP*TP*AP*(F4H)P*AP*CP*GP*C)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 10 nucleotides
Theoretical weight: 3.08 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand SR 1 x SR
1 modified residue:
Ligand F4H 2 x F4H

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-D
Spacegroup: P212121
Unit cell:
a: 28.003Å b: 42.855Å c: 45.833Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.195 0.191 0.238
Expression system: Not provided

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