› 3see

X-ray diffraction
1.25Å resolution

Crystal structure of a putative sugar binding protein (BT_4411) from Bacteroides thetaiotaomicron VPI-5482 at 1.25 A resolution

Released:
DOI: 10.2210/pdb3see/pdb
PDB entry 3see coloured by chain, front view.
PDB entry 3see coloured by chain, side view.
PDB entry 3see coloured by chain, top view.
Source organism: Bacteroides thetaiotaomicron
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183578 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF4627 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 222 amino acids
Theoretical weight: 24.57 KDa
Source organism: Bacteroides thetaiotaomicron
Expression system: Escherichia coli
UniProt:
  • Canonical: Q89ZG6 (Residues: 13-233; Coverage: 100%)
Gene name: BT_4411
Sequence domains: Domain of unknown function (DUF4627)
Structure domains: Galactose-binding domain-like

Ligands and Environments

1 bound ligand:
Ligand NA 1 x NA
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P4322
Unit cell:
a: 50.473Å b: 50.473Å c: 228.461Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.131 0.13 0.149
Expression system: Escherichia coli

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