› 3taw

X-ray diffraction
1.7Å resolution

Crystal structure of a putative glycoside hydrolase (BDI_3141) from Parabacteroides distasonis ATCC 8503 at 1.70 A resolution

Released:
DOI: 10.2210/pdb3taw/pdb
PDB entry 3taw coloured by chain, front view.
PDB entry 3taw coloured by chain, side view.
PDB entry 3taw coloured by chain, top view.
Source organism: Parabacteroides distasonis ATCC 8503
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107956 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Family 43 glycosylhydrolase Chain: A
Molecule details ›
Chain: A
Length: 356 amino acids
Theoretical weight: 39.86 KDa
Source organism: Parabacteroides distasonis ATCC 8503
Expression system: Escherichia coli
UniProt:
  • Canonical: A6LGN3 (Residues: 32-386; Coverage: 92%)
Gene name: BDI_3141
Sequence domains: beta-1,4-mannooligosaccharide phosphorylase
Structure domains: Glycosyl hydrolase domain; family 43

Ligands and Environments

4 bound ligands:
Ligand UNL 2 x UNL
Ligand MG 1 x MG
Ligand ACT 2 x ACT
Ligand EDO 13 x EDO
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL14-1
Spacegroup: P41212
Unit cell:
a: 56.361Å b: 56.361Å c: 231.759Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.15 0.149 0.172
Expression system: Escherichia coli

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