3tdt

X-ray diffraction
2Å resolution

COMPLEX OF TETRAHYDRODIPICOLINATE N-SUCCINYLTRANSFERASE WITH 2-AMINO-6-OXOPIMELATE AND COENZYME A

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
homo trimer (preferred)
PDBe Complex ID:
PDB-CPX-157438 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Chain: A
Molecule details ›
Chain: A
Length: 274 amino acids
Theoretical weight: 29.92 KDa
Source organism: Mycobacterium tuberculosis variant bovis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P56220 (Residues: 1-274; Coverage: 100%)
Gene name: dapD
Sequence domains:
Structure domains:

Ligands and Environments


Cofactor: Ligand COA 1 x COA
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RUH2R
Spacegroup: R3
Unit cell:
a: 96Å b: 96Å c: 72.3Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.154 0.152 0.22
Expression system: Escherichia coli BL21(DE3)