› 3u41

X-ray diffraction
2.5Å resolution

Crystal structure of Escherichia coli DmsD in space group P212121

Released:
DOI: 10.2210/pdb3u41/pdb
PDB entry 3u41 coloured by chain, front view.
PDB entry 3u41 coloured by chain, side view.
PDB entry 3u41 coloured by chain, top view.
Source organism: Escherichia coli K-12
Entry authors: Stevens CM, Paetzel M

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-159675 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Tat proofreading chaperone DmsD Chains: A, B, C, D, E, F, G, H
Molecule details ›
Chains: A, B, C, D, E, F, G, H
Length: 207 amino acids
Theoretical weight: 23.65 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli
UniProt:
  • Canonical: P69853 (Residues: 1-204; Coverage: 100%)
Gene names: JW5262, b1591, dmsD, ynfI
Sequence domains: Nitrate reductase delta subunit
Structure domains: TorD-like

Ligands and Environments

5 bound ligands:
Ligand GOL 42 x GOL
Ligand SO4 1 x SO4
Ligand TRS 2 x TRS
Ligand CL 3 x CL
Ligand PEG 1 x PEG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CLSI BEAMLINE 08B1-1
Spacegroup: P212121
Unit cell:
a: 94.275Å b: 96.221Å c: 210.243Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.232 0.23 0.271
Expression system: Escherichia coli

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