› 3v10

X-ray diffraction
1.75Å resolution

Crystal structure of the collagen binding domain of Erysipelothrix rhusiopathiae surface protein RspB

Released:
DOI: 10.2210/pdb3v10/pdb
PDB entry 3v10 coloured by chain, front view.
PDB entry 3v10 coloured by chain, side view.
PDB entry 3v10 coloured by chain, top view.
Source organism: Erysipelothrix rhusiopathiae
Primary publication:
Collagen adhesin-nanoparticle interaction impairs adhesin's ligand binding mechanism.
Devi AS, Ogawa Y, Shimoji Y, Balakumar S, Ponnuraj K
Biochim Biophys Acta 1820 819-28 (2012)
PMID: 22538248

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182966 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rhusiopathiae surface protein B Chains: A, B
Molecule details ›
Chains: A, B
Length: 321 amino acids
Theoretical weight: 35.7 KDa
Source organism: Erysipelothrix rhusiopathiae
Expression system: Escherichia coli
UniProt:
  • Canonical: Q83VG5 (Residues: 31-350; Coverage: 42%)
Gene name: rspB
Sequence domains:
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ELETTRA BEAMLINE 5.2R
Spacegroup: P21
Unit cell:
a: 46.17Å b: 67.39Å c: 102.41Å
α: 90° β: 92.82° γ: 90°
R-values:
R R work R free
0.225 0.225 0.261
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Phylogenetic analysis of the bacterial Pro-Pro-endopeptidase domain reveals a diverse family including secreted and membrane anchored proteins.
van Leeuwen et al. (2021)
3 other articles

1 mention without citation

Isopeptide bond in collagen- and fibrinogen-binding MSCRAMMs.
Sridharan et al. (2016)