› 3vbi

X-ray diffraction
1.8Å resolution

Crystal Structure of AntD, an N-acyltransferase from Bacillus cereus in complex with dTDP-4-amino-4,6-dideoxyglucose and Coenzyme A

Released:
DOI: 10.2210/pdb3vbi/pdb
PDB entry 3vbi coloured by chain, front view.
PDB entry 3vbi coloured by chain, side view.
PDB entry 3vbi coloured by chain, top view.
Source organism: Bacillus cereus SJ1
Primary publication:
Structural studies of AntD: an N-Acyltransferase involved in the biosynthesis of D-Anthrose.
Kubiak RL, Holden HM
Biochemistry 51 867-78 (2012)
PMID: 22220494

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-164169 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Galactoside O-acetyltransferase Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 205 amino acids
Theoretical weight: 22.75 KDa
Source organism: Bacillus cereus SJ1
Expression system: Escherichia coli
Structure domains: Hexapeptide repeat proteins

Ligands and Environments

4 bound ligands:
Ligand COA 3 x COA
Ligand 0FX 3 x 0FX
Ligand BCT 3 x BCT
Ligand CL 1 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: P41
Unit cell:
a: 71.115Å b: 71.115Å c: 138.179Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.2 0.198 0.245
Expression system: Escherichia coli

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Citations

1 review citation

The structural biology of enzymes involved in natural product glycosylation.
Singh et al. (2012)
7 other articles