3vr2

X-ray diffraction
2.8Å resolution

Crystal structure of nucleotide-free A3B3 complex from Enterococcus hirae V-ATPase [eA3B3]

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170667 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
V-type sodium ATPase catalytic subunit A Chains: A, B, C
V-type sodium ATPase subunit B Chains: D, E, F
Molecule details ›
Chains: D, E, F
Length: 465 amino acids
Theoretical weight: 52.42 KDa
Source organism: Enterococcus hirae
Expression system: Cell free synthesis
UniProt:
  • Canonical: Q08637 (Residues: 1-458; Coverage: 100%)
Gene names: EHR_08265, ntpB
Sequence domains:
Structure domains: Rossmann fold

Ligands and Environments

No bound ligands
1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL41XU
Spacegroup: P21
Unit cell:
a: 121.8Å b: 121.5Å c: 128.26Å
α: 90° β: 90.06° γ: 90°
R-values:
R R work R free
0.201 0.198 0.243
Expression system: Cell free synthesis