› 3w9a

X-ray diffraction
1.99Å resolution

Crystal structure of the catalytic domain of the glycoside hydrolase family 131 protein from Coprinopsis cinerea

Released:
DOI: 10.2210/pdb3w9a/pdb
PDB entry 3w9a coloured by chain, front view.
PDB entry 3w9a coloured by chain, side view.
PDB entry 3w9a coloured by chain, top view.
Source organism: Coprinopsis cinerea okayama7#130
Primary publication:
Crystal structure of the N-terminal domain of a glycoside hydrolase family 131 protein from Coprinopsis cinerea.
Miyazaki T, Yoshida M, Tamura M, Tanaka Y, Umezawa K, Nishikawa A, Tonozuka T
FEBS Lett 587 2193-8 (2013)
PMID: 23711369

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108762 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
CBM1 domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 245 amino acids
Theoretical weight: 27.89 KDa
Source organism: Coprinopsis cinerea okayama7#130
Expression system: Escherichia coli
UniProt:
  • Canonical: A8NRB3 (Residues: 19-252; Coverage: 76%)
Gene name: CC1G_07166
Sequence domains: Glycoside hydrolase 131 catalytic N-terminal domain
Structure domains: Jelly Rolls

Ligands and Environments

1 bound ligand:
Ligand GOL 12 x GOL
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE AR-NW12A
Spacegroup: P1
Unit cell:
a: 59.2Å b: 68.421Å c: 69.168Å
α: 89.99° β: 72.87° γ: 85.81°
R-values:
R R work R free
0.191 0.188 0.236
Expression system: Escherichia coli

Quick links

Citations

3 citation in other articles

Dependence of the hydration status of bacterial light-harvesting complex 2 on polyol cosolvents.
Shi et al. (2017)
2 more