› 3wdo

X-ray diffraction
3.15Å resolution

Structure of E. coli YajR transporter

Released:
DOI: 10.2210/pdb3wdo/pdb
PDB entry 3wdo coloured by chain, front view.
PDB entry 3wdo coloured by chain, side view.
PDB entry 3wdo coloured by chain, top view.
Source organism: Escherichia coli
Primary publication:
Structure of the YajR transporter suggests a transport mechanism based on the conserved motif A.
Jiang D, Zhao Y, Wang X, Fan J, Heng J, Liu X, Feng W, Kang X, Huang B, Liu J, Zhang XC
Proc Natl Acad Sci U S A 110 14664-9 (2013)
PMID: 23950222

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-164210 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
MFS Transporter Chain: A
Molecule details ›
Chain: A
Length: 453 amino acids
Theoretical weight: 48.68 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL41XU, SSRF BEAMLINE BL17U
Spacegroup: P6122
Unit cell:
a: 128.725Å b: 128.725Å c: 165.149Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.272 0.271 0.29
Expression system: Escherichia coli

Quick links

Citations

22 review citations

Multidrug efflux pumps: structure, function and regulation.
Du et al. (2018)
21 more

54 mentions without citation

Energy coupling mechanisms of MFS transporters.
Zhang et al. (2015)
53 more