› 3wjb

X-ray diffraction
2.2Å resolution

Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148L/H158L (NB4) from Arabidopsis thaliana

Released:
DOI: 10.2210/pdb3wjb/pdb
PDB entry 3wjb coloured by chain, front view.
PDB entry 3wjb coloured by chain, side view.
PDB entry 3wjb coloured by chain, top view.
Source organism: Arabidopsis thaliana
Primary publication:
A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
Fukumoto K, Onoda A, Mizohata E, Bocola M, Inoue T, Schwaneberg U, Hayashi T
ChemCatChem (2014)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130275 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Peroxynitrite isomerase Rv2717c Chains: A, B
Molecule details ›
Chains: A, B
Length: 174 amino acids
Theoretical weight: 19.44 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: O64527 (Residues: 2-166; Coverage: 99%)
Gene names: At1g79260, YUP8H12R.14
Sequence domains: THAP4-like, heme-binding beta-barrel domain
Structure domains: Lipocalin

Ligands and Environments

2 bound ligands:
Ligand BA 4 x BA
Ligand P6G 2 x P6G
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-007 HF
Spacegroup: P41
Unit cell:
a: 67.803Å b: 67.803Å c: 130.19Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.197 0.194 0.248
Expression system: Escherichia coli

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