› 3wjg

X-ray diffraction
1.1Å resolution

Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148W/H158L (NB10) from Arabidopsis thaliana

Released:
DOI: 10.2210/pdb3wjg/pdb
PDB entry 3wjg coloured by chain, front view.
PDB entry 3wjg coloured by chain, side view.
PDB entry 3wjg coloured by chain, top view.
Source organism: Arabidopsis thaliana
Primary publication:
A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
Fukumoto K, Onoda A, Mizohata E, Bocola M, Inoue T, Schwaneberg U, Hayashi T
ChemCatChem (2014)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130275 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Peroxynitrite isomerase Rv2717c Chain: A
Molecule details ›
Chain: A
Length: 174 amino acids
Theoretical weight: 19.51 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: O64527 (Residues: 2-166; Coverage: 99%)
Gene names: At1g79260, YUP8H12R.14
Sequence domains: THAP4-like, heme-binding beta-barrel domain
Structure domains: Lipocalin

Ligands and Environments

1 bound ligand:
Ligand GOL 1 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL44XU
Spacegroup: P21212
Unit cell:
a: 59.94Å b: 79.41Å c: 36.477Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.16 0.158 0.188
Expression system: Escherichia coli

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