› 3wwo

X-ray diffraction
2.55Å resolution

S-selective hydroxynitrile lyase from Baliospermum montanum (apo1)

Released:
DOI: 10.2210/pdb3wwo/pdb
PDB entry 3wwo coloured by chain, front view.
PDB entry 3wwo coloured by chain, side view.
PDB entry 3wwo coloured by chain, top view.
Source organism: Baliospermum montanum
Primary publication:
Structural and functional analysis of hydroxynitrile lyase from Baliospermum montanum with crystal structure, molecular dynamics and enzyme kinetics.
Nakano S, Dadashipour M, Asano Y
Biochim Biophys Acta 1844 2059-67 (2014)
PMID: 25220808

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-112331 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
AB hydrolase-1 domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 288 amino acids
Theoretical weight: 32.52 KDa
Source organism: Baliospermum montanum
Expression system: Escherichia coli
UniProt:
  • Canonical: D1MX73 (Residues: 1-263; Coverage: 100%)
Gene name: bmhnl
Sequence domains: alpha/beta hydrolase fold
Structure domains: alpha/beta hydrolase

Ligands and Environments

2 bound ligands:
Ligand CA 2 x CA
Ligand MPD 4 x MPD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-007
Spacegroup: P212121
Unit cell:
a: 48.45Å b: 68.529Å c: 162.116Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.19 0.187 0.236
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Structures of almond hydroxynitrile lyase isoenzyme 5 provide a rationale for the lack of oxidoreductase activity in flavin dependent HNLs.
Pavkov-Keller et al. (2016)
11 other articles

1 mention without citation

Larger active site in an ancestral hydroxynitrile lyase increases catalytically promiscuous esterase activity.
Jones et al. (2020)