3zhf

X-ray diffraction
1.7Å resolution

gamma 2 adaptin EAR domain crystal structure with preS1 site1 peptide NPDWDFN

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-131144 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
AP-1 complex subunit gamma-like 2 Chain: A
Molecule details ›
Chain: A
Length: 124 amino acids
Theoretical weight: 13.76 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O75843 (Residues: 665-785; Coverage: 15%)
Gene name: AP1G2
Sequence domains: Adaptin C-terminal domain
Structure domains: Immunoglobulin-like
Large envelope protein Chain: B
Molecule details ›
Chain: B
Length: 9 amino acids
Theoretical weight: 931 Da
Source organism: Hepatitis B virus
Expression system: Not provided
UniProt:
  • Canonical: Q67953 (Residues: 85-91; Coverage: 2%)
Gene name: S

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Spacegroup: P212121
Unit cell:
a: 34.841Å b: 37.457Å c: 105.484Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.191 0.19 0.226
Expression systems:
  • Escherichia coli BL21(DE3)
  • Not provided