4b93

X-ray diffraction
2Å resolution

Complex of Vamp7 cytoplasmic domain with 2nd ankyrin repeat domain of Varp

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-159720 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Vesicle-associated membrane protein 7 Chain: A
Molecule details ›
Chain: A
Length: 189 amino acids
Theoretical weight: 21.52 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P70280 (Residues: 1-188; Coverage: 86%)
Gene names: Sybl1, Vamp7
Sequence domains:
Structure domains: Longin domain
Ankyrin repeat domain-containing protein 27 Chain: B
Molecule details ›
Chain: B
Length: 269 amino acids
Theoretical weight: 29.49 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q96NW4 (Residues: 659-921; Coverage: 25%)
Gene names: ANKRD27, PP12899
Sequence domains: Ankyrin repeats (3 copies)
Structure domains: Ankyrin repeat-containing domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-1
Spacegroup: C2221
Unit cell:
a: 69.57Å b: 122.66Å c: 158.6Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.215 0.213 0.25
Expression system: Escherichia coli BL21(DE3)