4bh1

X-ray diffraction
2.15Å resolution

H5 (tyTy) Influenza Virus Haemagglutinin in Complex with Avian Receptor Analogue 3'-SLN

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-173117 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (3 distinct):
Hemagglutinin Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 326 amino acids
Theoretical weight: 36.88 KDa
Source organism: Influenza A virus (A/turkey/Turkey/1/2005(H5N1))
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q207Z6 (Residues: 17-338; Coverage: 57%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains:
Hemagglutinin HA2 chain Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 166 amino acids
Theoretical weight: 19.13 KDa
Source organism: Influenza A virus (A/turkey/Turkey/1/2005(H5N1))
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q207Z6 (Residues: 347-512; Coverage: 29%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, GAL, SIA
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: P21
Unit cell:
a: 70.859Å b: 228.288Å c: 71.92Å
α: 90° β: 113.71° γ: 90°
R-values:
R R work R free
0.206 0.205 0.224
Expression system: Spodoptera frugiperda