4c53

X-ray diffraction
4.14Å resolution

Crystal Structure of Guanarito virus GP2 in the post-fusion conformation

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183830 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (4 distinct):
Glycoprotein G2 Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 138 amino acids
Theoretical weight: 16.29 KDa
Source organism: Mammarenavirus guanaritoense
Expression system: Homo sapiens
UniProt:
  • Canonical: Q8AYW1 (Residues: 292-418; Coverage: 27%)
Gene names: GP-C, GPC
Sequence domains: Arenavirus glycoprotein

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04
Spacegroup: P41
Unit cell:
a: 98.5Å b: 98.5Å c: 78.74Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.256 0.255 0.276
Expression system: Homo sapiens