4dj6

X-ray diffraction
2.61Å resolution

Structure of the hemagglutinin from a highly pathogenic H7N7 influenza virus

Released:
Model geometry
Fit model/data

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-180463 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (3 distinct):
Hemagglutinin Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 327 amino acids
Theoretical weight: 35.88 KDa
Source organism: Influenza A virus (A/Netherlands/219/2003(H7N7))
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q6VMK1 (Residues: 19-341; Coverage: 58%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains:
Hemagglutinin Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 177 amino acids
Theoretical weight: 20.43 KDa
Source organism: Influenza A virus (A/Netherlands/219/2003(H7N7))
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q6VMK1 (Residues: 342-515; Coverage: 31%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
1 bound ligand:
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: APS BEAMLINE 22-ID
Spacegroup: C2
Unit cell:
a: 201.949Å b: 116.573Å c: 117.32Å
α: 90° β: 124.92° γ: 90°
R-values:
R R work R free
0.205 0.203 0.236
Expression system: Trichoplusia ni