› 4dmi

X-ray diffraction
1.5Å resolution

Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)

Released:
DOI: 10.2210/pdb4dmi/pdb
PDB entry 4dmi coloured by chain, front view.
PDB entry 4dmi coloured by chain, side view.
PDB entry 4dmi coloured by chain, top view.
Source organism: unidentified
Entry authors: Craig TK, Abendroth J, Lorimer D, Burgin Jr AB, Segall A, Rohwer F

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo pentamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-164396 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid Protein Chains: A, B, C, D, E
Molecule details ›
Chains: A, B, C, D, E
Length: 176 amino acids
Theoretical weight: 18.63 KDa
Source organism: unidentified
Expression system: Escherichia coli BL21(DE3)
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand EDO 3 x EDO
Ligand NA 4 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 5.0.1
Spacegroup: P21
Unit cell:
a: 57.57Å b: 147.87Å c: 57.85Å
α: 90° β: 112.05° γ: 90°
R-values:
R R work R free
0.16 0.158 0.182
Expression system: Escherichia coli BL21(DE3)

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